Matthias Schlachter
	Chair of Pattern Recognition and Image Processing Institute for Computer Science Albert-Ludwigs-University Georges-Koehler-Allee 052, room 01-022 D-79110 Freiburg i.Br., Germany
	Telefon:	+49-(0)761-203-8284
	Fax:	+49-(0)761-203-8262
	Email:

Teaching

SS 2010

• Seminar: Algorithms for Cluster Analysis (Topic: Clustering Ensembles)

WS 2009/10

• Assistance: Lecture: Fundamentals of Pattern Recognition
• Proseminar: Image Processing Toolbox mit ImageJ
• Lab course: Lab Course on Image Processing (Experiment: Autofocus Systems)

Publications

• M. Schlachter, M. Reisert, C. Herz, F. Schlurmann, S. Lassmann, M. Werner, H. Burkhardt, O. Ronneberger
  "Harmonic Filters for 3D Multichannel Data: Rotation Invariant Detection of Mitoses in Colorectal Cancer." [pdf]
  IEEE Transactions on Medical Imaging, Vol.29(8):1485-1495, August 2010
  (Special Issue on Multivariate Microscopy Image Analysis)
  

Diploma Thesis

Detection and Classification of Mitosis Cells in 3D Tissue Samples of Colorectal Cancer [pdf]

Student Research Project

Quantitative Analysis of Microscopic Data of Moss Protoplasts [pdf]
(Original title: Quantitative Analyse mikroskopischer Aufnahmen von Moos-Protoplasten)

Software

HDF Plugin for ImageJ (Beta)

The plugin and source code is now available at http://imagej-hdf.googlecode.com.

Old HDF5 Plugin for ImageJ (Beta) can be found here: hdf5_ij_plugin.zip (06.08.10) (see HDF5 plugin page for installation notes)