Homepage of Maja Temerinac-Ott

Dipl.-Inf. Maja Temerinac-Ott

Albert-Ludwigs-Universität Freiburg
Institut für Informatik
Lehrstuhl für Mustererkennung und Bildverarbeitung
Georges-Köhler-Allee 52, Raum 01-022
D-79110 Freiburg

Telefon:

+49-(0)761-203-8284

Fax:

+49-(0)761-203-8262

Email:

CV

Born 05.11.1980 in Novi Sad, Yugoslavia

primary school in Novi Sad and Hannover, Germany

Highschool in Breisach and Gundelfingen, Germany

1997 one year scholarship at Canterbury, Fort Wayne, Indiana, USA

2000-2006 Diploma Studies in Computer Science, Minor in Mathematics, at Albert-Ludwigs-Univerisity, Freiburg, Germany
2006-present PhD studies in Computer Science at Albert-Ludwigs-Univerisity, Freiburg, Germany
2009 Anita Borg Scholar Homepage

Research Interests

Pattern Recognition for Biological Data

searching biological databases for gene expression patterns

Image Processing

deconvolution
multiview reconstruction
image registration

Building virtual models

Anatomical model for the zebrafish

Publications

Journal Papers

Maja Temerinac, Marco Reisert and Hans Burkhardt, "Invariant Features for Searching in Protein Fold Databases", International Journal on Computer Mathematics, 'Special Issue on Bioinformatics', Vol. 84, Issue 5, p. 635-651, May 2007

Conference Papers

Maja Temerinac, Margret Keuper and Hans Burkhardt, "Evaluation of a New Point Clouds Registration Method based on Group Averaging Features", pp. 2452-2455, in Proceedings of 20th International Conference on Pattern Recognition (ICPR), 23-26 August 2010, Istanbul, Turkey.(pdf)
L. Mavridis, V.Venkatraman, D.W. Ritchie, N.Morikawa, R.Andonov, A.Cornu, N.Malod-Dognin, J.Nicolas, M.Temerinac-Ott, M.Reisert, H.Burkhardt, A.Axenopoulos, and P.Daras, "SHREC'10 Track: Protein Model Classification", Eurographics Workshop on 3D Object Retrieval, May 2, 2010, Norrkoeping, Sweden (pdf)
Maja Temerinac and Hans Burkhardt, "Multichannel Image Restoration Based on Optimization of the Structural Similarity Index", pp. 812-816, in Proceedings of 43rd Asilomar Conference on Signals, Systems and Computers, 1-4 November 2009, Pacific Grove, USA (pdf)
Maja Temerinac, Marco Reisert and Hans Burkhardt, "Protein structure description by invariant features for classification and retrieval in large data bases", accepted for Image Analysis and in Vivo Pharmachology (IAVP), 12-14 April 2007, Roskilde, Denmark (talk)
Maja Temerinac, Marco Reisert and Hans Burkhardt, "SHape REtrieval Contest 2007: Protein Retrieval Track", in Proceedings of SHREC2007 3D Shape Retrieval Contest, SMI'07, Lyon, France, 13-15 June 2007 (pdf)

Diploma Thesis

"Algorithms for Protein Retrieval and Classification based on Structural Features"(pdf), Albert-Ludwigs-Universität Freiburg, Aug 2006

Other

"Über die Entwicklung der Universitäten aus Sicht der Industrie", Das Humboldt-Labor- Experimentieren mit den Grenzen der klassischen Universität, Publikation zum 550. Jubiläum der Albert-Ludwigs-Universität Freiburg, pp.32-34, August 2007(Artikel)
Poem from American Literature Class at Canterbury Highschool in Fortwayne, IN, USA, 1997
"Pythagoraeische Zahlen ", alpha-Mathematik als Hobby,11-12/ 1996(Artikel)

Competition

Organizing the track on proteins for the shape retrieval contest SHREC 2007

Workshops

Second SPIM Workshop at Conway Institute, University College, Dublin, Ireland, September 2-4, 2010

Workshop on "Sparsity and Modern Mathematical Methods for High Dimensional Data", Brussels, Belgium, April 6-10, 2010 homepage

First SPIM Workshop at MPI-CBG, Dresden, Germany, September 24-25, 2009

Lipari School - 21st International School for Computer Science Researchers, "Molecular and Medical Image Analysis and BioInformatics", July 11-18, 2009 homepage

Teaching

Lecture Assistance: "Computer Vision I", Prof. Brox WS 2010/2011
Lab Course Experiment Supervision: "Pattern Recognition", Prof. Brox WS 2010/2011
Seminar Organization and Topic Supervision: "Algorithms for Cluster Analysis", Prof. Burkhardt SS 2010
Lab Course Experiment Supervision: "Pattern Recognition", Prof. Burkhardt WS 2009/2010
Seminar Topic Supervision: "Image Processing Toolbox mit ImageJ", Prof. Burkhardt SS 2008
Lecture Assistance: "Algorithms for Digital Image Processing", Prof. Burkhardt SS 2008
Sommercampus Talk: "Matlab Kurs" Oktober 2007
Seminar Topic Supervision: "Methoden und Algorithmen zur Bildsegmentierung", Prof. Burkhardt SS 2007 and SS 2009
Lecture Assistance: "Algorithms for Digital Image Processing", Prof. Burkhardt SS 2007
Proseminar Organization: "Image Processing Toolbox mit ImageJ", Prof. Burkhardt WS 2006/2007
Lecture Assistance: "Algorithms for Picture Analysis", Prof. Klette SS 2005
Lecture Tutor: "Pattern Recognition I", Prof. Burkhardt WS2004/2005, WS2005/2006

Supervised Student Projects

Identifizierung von Sprengstoffen und Gefahrensubstanzen in Infrarotbildern, Petya Dasheva, Nov 2010 - May 2011
Registration of Microscopical Images based on the Structural Similarity Index Measure, Christoph Bick, Apr 2010 - Oct 2010
Evaluation of Blind Deconvolution Algorithms, Katherina Renz, Dez 2009 - Mar 2010
Entwurf und Implementation von Verfahren zur Detektion von Landmarken in 3D Volumen Daten, Ruben Schilling, Oct 2006 - Jan 2007

Interests

Informatica Feminale

Course 2007: Content Based Image Retrieval with Matlab (slides: Fahrplan, Montag, Dienstag, Mittwoch)

IAESTE (International Association for Exchange of Students in Technical Experiences)

Homepage LC Freiburg