iRoCS Toolbox  1.1.0
defaultParameters.hh
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1 /*
2  * defaultParameters.h
3  *
4  * Created on: Nov 1, 2010
5  * Author: liu
6  */
7 
8 #ifndef DEFAULTPARAMETERS_H_
9 #define DEFAULTPARAMETERS_H_
10 
11 #ifdef HAVE_CONFIG_H
12 #include <config.hh>
13 #endif
14 
15 #define MyDataDims 3
16 #define MyDataType float
17 #define MyLabelT int
18 
19 //#define DEFAULT_dataFileName "/misc/lmbraid9/liu/Data/Test/part1PI72.h5"
20 #define DEFAULT_dataFileName "/misc/lmbraid9/liu/Data/Cellwall/annotated_PI72_root02a.h5"
21 #define DEFAULT_filePosition "/misc/lmbraid9/liu/Data/Test"
22 #define DEFAULT_datasetName "/t0/channel0"
23 //#define DEFAULT_datasetName "/crop"
24 #define DEFAULT_outFileNameBase "/misc/lmbraid9/liu/Data/Test/testCWatershed2"
25 
26 
27 //for GAC
28 #define DEFAULT_kappa1 0.1
29 #define DEFAULT_delta_t1 0.25
30 #define DEFAULT_n_iters1 2
31 #define DEFAULT_countour_weight 3
32 #define DEFAULT_expansion_weight 1
33 #define DEFAULT_kappa2 3.0/255
34 #define DEFAULT_delta_t2 5
35 #define DEFAULT_n_iters2 40
36 
37 //for watershed
38 #define DEFAULT_kappa3 0.05
39 #define DEFAULT_delta_t3 0.5
40 #define DEFAULT_n_iters3 9
41 #define DEFAULT_sigma3 1
42 #define DEFAULT_thresholdOnL1 -0.0015
43 #define DEFAULT_alpha3 0.0015
44 #define DEFAULT_morphSize3 2
45 #define DEFAULT_thresholdOnVolume 8000
46 
47 #endif /* DEFAULTPARAMETERS_H_ */