iRoCS Toolbox  1.1.0
Namespaces | Functions
AttachIRoCSSCTToCellSegmentationWorker.hh File Reference
#include <config.hh>
#include <libProgressReporter/ProgressReporter.hh>
#include <libArrayToolbox/Array.hh>
#include <libArrayToolbox/algo/ShellCoordinateTransform.hh>
Include dependency graph for AttachIRoCSSCTToCellSegmentationWorker.hh:

Go to the source code of this file.

Namespaces

 iRoCS
 

Functions

void iRoCS::attachIRoCS (ShellCoordinateTransform &sct, atb::Array< int, 3 > const &segmentation, int backgroundLabel, int downSampleRatio, double segmentLength, double margin, blitz::TinyVector< double, 3 > const &posQC=blitz::TinyVector< double, 3 >(-std::numeric_limits< double >::infinity()), blitz::TinyVector< double, 3 > const &xDirection=blitz::TinyVector< double, 3 >(-std::numeric_limits< double >::infinity()), std::string const &debugFileName="", atb::Array< double, 3 > *l=NULL, atb::Array< double, 3 > *r=NULL, atb::Array< double, 3 > *p=NULL, iRoCS::ProgressReporter *pr=NULL)
 
void iRoCS::boundaryDetection (blitz::Array< bool, 3 > const &segmentation, blitz::Array< bool, 3 > &border)
 
void iRoCS::extractPosition (blitz::Array< bool, 3 > &shell, std::vector< blitz::TinyVector< double, 3 > > &shellPoints)