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Display the complete list (361 publications)
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2015
Journal
Large-scale brain network abnormalities in Huntington disease revealed by structural covariance   doi>
L. Minkova, S. Eickhoff, Ahmed Abdulkadir, C. Kaller, J. Peter, E. Scheller, J. Lahr, R. Roos, A. Durr, B. Leavitt, S. Tabrizi, S. Klöppel
Human Brain Mapping, Epub ahead of print, Oct 2015
Detection of Motor Changes in Huntington Disease Using Dynamic Causal Modeling   doi>
L. Minkova, E. Scheller, J. Peter, Ahmed Abdulkadir, C. Kaller, R. Roos, A. Durr, B. Leavit, S. Tabrizi, S. Kloeppel
Frontiers in Human Neuroscience, 9(634): 1--13, Nov 2015
The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin   doi>
D. Epting, K. Slanchev, C. Boehlke, S. Hoff, N. Loges, T. Yasunaga, L. Indorf, S. Nestel, S. Lienkamp, H. Omran, W. Kuehn, Olaf Ronneberger, G. Walz, a. Kramer-Zucker
Development, 142(1): 174--184, Jan 2015

Conference
U-Net: Convolutional Networks for Biomedical Image Segmentation   doi> Code/data
Olaf Ronneberger, Philipp Fischer, Thomas Brox
Medical Image Computing and Computer-Assisted Intervention (MICCAI), Springer, LNCS, Vol.9351: 234--241, 2015
q-Space Deep Learning for Twelve-Fold Shorter and Model-Free Diffusion MRI Scans   PaperMICCAI2015.pdf
V. Golkov, Alexey Dosovitskiy, P. Sämann, J. Sperl, T. Sprenger, M. Czisch, M. Menzel, P. Gómez, A. Haase, Thomas Brox, D. Cremers
Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2015
Bilevel Optimization with Nonsmooth Lower Level Problems   Paperochs_ssvm2015_bilevel.pdf doi>
Peter Ochs, R. Ranftl, Thomas Brox, T. Pock
International Conference on Scale Space and Variational Methods in Computer Vision (SSVM), Springer, LNCS, Vol.9087: 654--665, 2015
Cell segmentation and tracking in phase contrast images using graph cut with asymmetric boundary costs   Paperpaper-Bensch2015.pdf doi> Code/data
Robert Bensch, Olaf Ronneberger
IEEE International Symposium on Biomedical Imaging (ISBI): 1220--1223, 2015
3D-Reconstruction of Indoor Environments from Human Activity   Paperfrank15icra.pdf
B. Frank, M. Ruhnke, Maxim Tatarchenko, W. Burgard
IEEE International Conference on Robotics and Automation (ICRA), 2015
Learning to Generate Chairs with Convolutional Neural Networks   PaperGenerate_Chairs_arxiv.pdf Code/data
Alexey Dosovitskiy, J. Springenberg, Thomas Brox
IEEE International Conference on Computer Vision and Pattern Recognition (CVPR), 2015
Efficient Decomposition of Image and Mesh Graphs by Lifted Multicuts   PaperliftedMC.pdf
Margret Keuper, E. Levinkov, N. Bonneel, G. Lavoue, Thomas Brox, B. Andres
IEEE International Conference on Computer Vision (ICCV), 2015
Motion Trajectory Segmentation via Minimum Cost Multicuts   PapermotionSeg.pdf Code/data
Margret Keuper, B. Andres, Thomas Brox
IEEE International Conference on Computer Vision (ICCV), 2015
Video Segmentation with Just a Few Strokes   Code/data
Naveen Shankar Nagaraja, Frank R. Schmidt, Thomas Brox
IEEE International Conference on Computer Vision (ICCV), 2015
Unsupervised Generation of a Viewpoint Annotated Car Dataset from Videos   PaperSedaghatNima2015.pdf
Nima Sedaghat, Thomas Brox
IEEE International Conference on Computer Vision (ICCV), 2015
Global, Dense Multiscale Reconstruction for a Billion Points   Paperummenhofer2015Global.pdf Code/data Project
Benjamin Ummenhofer, Thomas Brox
IEEE International Conference on Computer Vision (ICCV), 2015
FlowNet: Learning Optical Flow with Convolutional Networks   Paperflownet.pdf Code/data
Alexey Dosovitskiy, Philipp Fischer, Eddy Ilg, P. Häusser, C. Hazırbaş, V. Golkov, P. Smagt, D. Cremers, Thomas Brox
IEEE International Conference on Computer Vision (ICCV), 2015
Striving for Simplicity: The All Convolutional Net   Paperstriving_for_simplicity.pdf
J. Springenberg, Alexey Dosovitskiy, Thomas Brox, M. Riedmiller
ICLR (workshop track), 2015
Image Orientation Estimation with Convolutional Networks   Paperimage_orientation.pdf
Philipp Fischer, Alexey Dosovitskiy, Thomas Brox
German Conference on Pattern Recognition (GCPR), Springer, 2015
Spatiotemporal Deformable Prototypes for Motion Anomaly Detection   Paperpaper-Bensch2015a.pdf doi> Code/data
Robert Bensch, Thomas Brox, Olaf Ronneberger
British Machine Vision Conference (BMVC), BMVA Press: 189.1--189.12, 2015
Combinatorial Regularization of Descriptor Matching for Optical Flow Estimation  
Benjamin Drayer, Thomas Brox
British Machine Vision Conference (BMVC), 2015

Others
Long Term Motion Analysis for Object Level Grouping and Nonsmooth Optimization Methods   Paperochs_PhDThesis.pdf doi>
Peter Ochs
PhD thesis from Albert-Ludwigs-Universität Freiburg, Mar 2015
 
2014
Journal
The iRoCS Toolbox – 3D Analysis of the Plant Root Apical Meristem at Cellular Resolution   doi> Code/data
Thorsten Schmidt, T. Pasternak, Kun Liu, T. Blein, D. Aubry-Hivet, A. Dovzhenko, J. Dürr, W. Teale, F. Ditengou, Hans Burkhardt, Olaf Ronneberger, K. Palme
The Plant Journal, 77(5): 806--814, Mar 2014
iPiano: Inertial Proximal Algorithm for Non-convex Optimization   Paperipiano.pdf doi>
Peter Ochs, Y. Chen, Thomas Brox, T. Pock
SIAM Journal on Imaging Sciences, 7(2): 1388-1419, 2014
Correction of inter-scanner and within-subject variance in structural MRI based automated diagnosing   doi>
D. Kostro, Ahmed Abdulkadir, A. Durr, R. Roos, B. Leavitt, H. Johnson, D. Cash, S. Tabrizi, R. Scahill, Olaf Ronneberger, S. Kloeppel
NeuroImage, 98: 405--415, Sep 2014
Validation of Fluorescence Molecular Tomography/Micro-CT Multimodal Imaging In Vivo in Rats   doi>
D. Vonwil, J. Christensen, S. Fischer, Olaf Ronneberger, V. Shastri
Molecular Imaging and Biology, 16(3): 350--361, 2014
Subgroups of Alzheimers Disease - Stability of Empirical Clusters Over Time   doi>
J. Peter, Ahmed Abdulkadir, C. Kaller, D. Kuemmerer, M. Huell, W. Vach, S. Kloeppel
Journal of Alzheimers Disease, 42(2): 651--661, 2014
Rotation-Invariant HOG Descriptors using Fourier Analysis in Polar and Spherical Coordinates   doi> Code/data
Kun Liu, Henrik Skibbe, Thorsten Schmidt, T. Blein, K. Palme, Thomas Brox, Olaf Ronneberger
International Journal of Computer Vision, 106(3): 342-364, 2014
Segmentation of moving objects by long term video analysis   Paperpami_moseg.pdf doi> Code/data
Peter Ochs, J. Malik, Thomas Brox
IEEE Transactions on Pattern Analysis and Machine Intelligence, 36(6): 1187 - 1200, Jun 2014

Conference
Voxel-based multi-class classification of AD, MCI, and elderly controls   Code/data
Ahmed Abdulkadir, J. Peter, Olaf Ronneberger, Thomas Brox, S. Kloeppel
Medical Image Computing and Computer-Assisted Intervention (MICCAI) 2014 - CADDementia Challenge, 2014
Reduction of Confounding Effects with Voxel-wise Gaussian Process Regression in Structural MRI   doi>
Ahmed Abdulkadir, Olaf Ronneberger, S. Tabrizi, S. Kloeppel
International Workshop on Pattern Recognition in Neuroimaging (PRNI) 2014: 1-4, 2014
Optical Flow Guided Cell Segmentation and Tracking in Developing Tissue   doi>
Kun Liu, S. Lienkamp, A. Shindo, J. Wallingford, G. Walz, Olaf Ronneberger
IEEE International Symposium on Biomedical Imaging (ISBI): 298--301, 2014

Display the complete list (361 publications)
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